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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825232.1_cds_XP_016502255.1_15917
CDS Infomation

[gene=LOC107820479] [db_xref=GeneID:107820479] [protein=vacuolar amino acid transporter 1-like] [protein_id=XP_016502255.1] [location=complement(join(1681..1776,2307..2369,2468..2511,2738..2903,2987..3122,3233..3452,3733..3913,4083..4106,4416..4630,4781..5100,5250..5455))] [gbkey=CDS]
Sequence

ATGAGGAATTCTATATCAGAACAGAGTTTTTACATAGAGAGTGAGGAAGAGGATGATGAA
CAGGAGAAGAATTTGGGAAAAGATGAGAATGAAGAAGAAGGGAATGAATCTGATTTTTCC
AATTACTCGAATGAAAATGATGACGATAATAATCGCCAGCAGAGCAAACCTAATTCCTTA
GCCTCTGCTTGGCCTCAGAGTTACAGGCAATCTATGGATATGTTCAGTAATGTACCATCT
CCAAGTCTTAACTTTTTGGGAACGCCTTCGTTATCTCGTCTAGGGAGCTCATTCTTGGGC
TCATCACTCATAAGAAGGCACACTCCTGAGATATTGCCCTCTCTTCAGAAGCCTCTGATA
CCGTCAGCAGAAGAAGAAAAAGCACCTCACCGACGTAGTTCTCATGGTTTGCTGCCTCCC
ATACACCCCAGAAAGTCTTCTATGAAGAAAATTCCTGAGCCCTCCAAGGATGCACATGGA
ATTACCATGTCTCGCCAAAGCTCCTACGGCCAAGCTGTGGTAAATGGCATGAATGTTCTC
TGTGGAGTAGGAATCCTTTCTACTCCTTATGCTATGAAGGAAGGTGGATGGTCTGGACTT
TCAATATTATTCATTTTTGGTGTGCTTTCTTTCTATACTGGCATTCTCCTGAGATCCTGC
TTGGACAGCCAACCTGGGCTCGAAACGTACCCTGACATTGGTCAGGCTGCCTTTGGTACA
CCCGGACGTATTTTTATATCAATAATCTTATATGTGGAATTATACTTCTCTTGTATTGAA
TACATAATCTTGGAGGGTGATAACTTGTCTGCTATATTTCCAAATGCCCATTTAAGTCTG
GGTGGGTTTGAGTTAGATGCTCGCCATCTTTTTGTTTTGATAGCAACCCTGGCTGTTCTT
CCTACTGTTTGGCTGCGCGACCTCAGCGTTCTAAGTTATATCTCAGTTGGAGGAGTTGTT
GCTTCTGTTTTGGTGGTTCTTTGCCTGTACTGGGCTGGCTTGGTGGATCATGTAGGCTTT
GAAAGCAAAGGGACTGTACTTAACCTATCTACTCTTCCTGTTGCTATTGGACTTTATGGA
TTTTGTTACTCTGGGCATGCGGTCTTTCCCAATATATATACATCCCTGGCAGATCGTAGT
CAATTTCCTGCTGTCCTCTTGACCTGTTTTGGTATGGTGACTCTGTTGTATGGTGGAACA
GCTGTGATGGGATACCTAATGTTCGGGGACTCAGCTGATTCCCAGTTTACTCTAAATTTG
CCCAAAGGTTTAATAGCTTCTAAGGTTGCTGTGTGGACAACTGTCGTTAATCCTTTCACA
AAATATGCTTTAACCTTGTCTCCCGTGGCAATGAGTTTGGAGGAATTGTTGCCGTCAAAG
CACGCCAAATCTCACGTGTATCCGATCCTCATTAGAACTGCATTGGCATTCTCCACATTA
GTGGTTGGTCTTTCTATTCCCTTTTTTGGTTTGGTGATGGCATTGATTGGATCTTTACTT
ACAATGCTAGTGACTCTGATACTACCTTGTGTTTGCTTCCTGAGAATCTTGAAGGGAAAA
ACAAGTCGTCTTCAGGTTTCAGTATGTGTTCTTATTATCATAGTAGGTACTCTATCAGCA
GTTATCGGGTCCTATTCAGCTGTCTCCAATATCATCCAGAGTTTGAGCTGA

Peptide Sequence

PEP ID

XP_016502255.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tabacum]
Sequence

MRNSISEQSFYIESEEEDDEQEKNLGKDENEEEGNESDFSNYSNENDDDNNRQQSKPNSL
ASAWPQSYRQSMDMFSNVPSPSLNFLGTPSLSRLGSSFLGSSLIRRHTPEILPSLQKPLI
PSAEEEKAPHRRSSHGLLPPIHPRKSSMKKIPEPSKDAHGITMSRQSSYGQAVVNGMNVL
CGVGILSTPYAMKEGGWSGLSILFIFGVLSFYTGILLRSCLDSQPGLETYPDIGQAAFGT
PGRIFISIILYVELYFSCIEYIILEGDNLSAIFPNAHLSLGGFELDARHLFVLIATLAVL
PTVWLRDLSVLSYISVGGVVASVLVVLCLYWAGLVDHVGFESKGTVLNLSTLPVAIGLYG
FCYSGHAVFPNIYTSLADRSQFPAVLLTCFGMVTLLYGGTAVMGYLMFGDSADSQFTLNL
PKGLIASKVAVWTTVVNPFTKYALTLSPVAMSLEELLPSKHAKSHVYPILIRTALAFSTL
VVGLSIPFFGLVMALIGSLLTMLVTLILPCVCFLRILKGKTSRLQVSVCVLIIIVGTLSA
VIGSYSAVSNIIQSLS

Transcript Sequence

Gene sequence data has not been registered.